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Herb: 5Ingredient: 1Links: 5
Arranging relationship network...
Record Fields
Scalar fields from the final ingredient record.
- Ingredient Id
- 14036
- Core Entity Id
- 18770
- Source Entity Count
- 1
- Preferred Name
- Cembrene-a
- Name En
- Pubchem Id
- 162965467
- Smiles Canonical
- CC1=C\C/C=C(\C)CC/C=C(\C)CC[C@H](C(C)C)/C=C\1
- Molecular Formula
- C20H32
- Molecular Weight
- 272.4760
- Inchikey
- DMHADBQKVWXPPM-JXXMNCPBSA-N
- Inchi
- InChI=1S/C20H32/c1-16(2)20-14-12-18(4)10-6-8-17(3)9-7-11-19(5)13-15-20/h8,10-12,14,16,20H,6-7,9,13,15H2,1-5H3/b14-12-,17-8+,18-10+,19-11+/t20-/m1/s1
- Isomeric Smiles
- C/C/1=C/CC/C(=C\C[C@H](CC/C(=C\CC1)/C)C(=C)C)/C
- Cas Id
- 31570-39-5
- Ob Score
- 16.7350
- Mol Logp
- 6.6178
- Num H Donors
- 0
- Num H Acceptors
- 0
- Num Rotatable Bonds
- 1
- Drug Likeness
- 0.4620
- Polar Surface Area
- 0.0000
- Molecular Volume
- 275.7700
- Alogp
- 6.9070
Names
Preferred names, aliases, and source labels retained in the final schema.
Name
Cembrene,A
Role
Molecule_name
Source
SymMap_v2
Preferred
Yes
Name
Neocembrene
Role
Molecule_name
Source
SymMap_v2
Preferred
Yes
Name
Cembrene,a
Role
preferred
Source
HERB_v2
Preferred
Yes
Name
Cembrene,a
Role
preferred
Source
itcmdb_public
Preferred
Yes
Name
Cembrene-A
Role
preferred
Source
SymMap_v2
Preferred
Yes
Name
Neocembrene
Role
preferred
Source
ETCM_v2
Preferred
Yes
Name
Neocembrene
Role
preferred
Source
itcmdb_public
Preferred
Yes
Name
Neocembrene
Role
preferred
Source
TCMBank
Preferred
Yes
Name
Neocembrene
Role
preferred
Source
SymMap_v2
Preferred
Yes
Name
Neocembrene
Role
preferred
Source
HERB_v2
Preferred
Yes
Name
cembrene-A
Role
preferred
Source
ETCM_v2
Preferred
Yes
Name
cembrene-A
Role
preferred
Source
TCMBank
Preferred
Yes
Name
乳香
Role
TCM_name
Source
TCMBank
Preferred
No
Name
西伯利亚云杉
Role
TCM_name
Source
TCMBank
Preferred
No
Name
XI BO LI YA YUN SHAN
Role
TCM_name2
Source
TCMBank
Preferred
No
Name
RU XIANG
Role
TCM_name_en
Source
TCMBank
Preferred
No
Name
Siberian Spruce
Role
TCM_name_en
Source
TCMBank
Preferred
No
Name
(+)-Cembrene
Role
alias
Source
itcmdb_public
Preferred
No
Name
(+)-Cembrene
Role
alias
Source
HERB_v2
Preferred
No
Name
(+)-Cembrene A
Role
alias
Source
itcmdb_public
Preferred
No
Name
(+)-Cembrene A
Role
alias
Source
HERB_v2
Preferred
No
Name
(1E,5E,9E,12R)-1,5,9-trimethyl-12-prop-1-en-2-ylcyclotetradeca-1,5,9-triene
Role
alias
Source
itcmdb_public
Preferred
No
Name
(1E,5E,9E,12R)-1,5,9-trimethyl-12-prop-1-en-2-ylcyclotetradeca-1,5,9-triene
Role
alias
Source
HERB_v2
Preferred
No
Name
(1E,5E,9E,12R)-1,5,9-trimethyl-12-propan-2-ylcyclotetradeca-1,5,9-triene
Role
alias
Source
SymMap_v2
Preferred
No
Name
(R)-(-)-Cembrene A
Role
alias
Source
HERB_v2
Preferred
No
Name
(R)-(-)-Cembrene A
Role
alias
Source
itcmdb_public
Preferred
No
Name
2WGK4P4230
Role
alias
Source
itcmdb_public
Preferred
No
Name
2WGK4P4230
Role
alias
Source
HERB_v2
Preferred
No
Name
31570-39-5
Role
alias
Source
HERB_v2
Preferred
No
Name
31570-39-5
Role
alias
Source
itcmdb_public
Preferred
No
Name
AC1NSZ0A
Role
alias
Source
SymMap_v2
Preferred
No
Name
CHEBI:7501
Role
alias
Source
itcmdb_public
Preferred
No
Name
CHEBI:7501
Role
alias
Source
HERB_v2
Preferred
No
Name
CHEMBL571450
Role
alias
Source
itcmdb_public
Preferred
No
Name
CHEMBL571450
Role
alias
Source
HERB_v2
Preferred
No
Name
Neocembrene A
Role
alias
Source
HERB_v2
Preferred
No
Name
Neocembrene A
Role
alias
Source
itcmdb_public
Preferred
No
Name
8.活血化瘀药(33-33)
Role
level1_name
Source
TCMBank
Preferred
No
Name
blood-activating and stasis-resolving medicinal
Role
level1_name_en
Source
TCMBank
Preferred
No
Name
1.活血止痛药(7-7)
Role
level2_name
Source
TCMBank
Preferred
No
Name
blood-activating analgesic medicinal
Role
level2_name_en
Source
TCMBank
Preferred
No
Aliases
Additional names normalized into the restored final schema.
Cembrene,ANeocembrene乳香西伯利亚云杉XI BO LI YA YUN SHANRU XIANGSiberian Spruce(+)-Cembrene(+)-Cembrene A(1E,5E,9E,12R)-1,5,9-trimethyl-12-prop-1-en-2-ylcyclotetradeca-1,5,9-triene(1E,5E,9E,12R)-1,5,9-trimethyl-12-propan-2-ylcyclotetradeca-1,5,9-triene(R)-(-)-Cembrene A2WGK4P423031570-39-5AC1NSZ0ACHEBI:7501CHEMBL571450Neocembrene A8.活血化瘀药(33-33)blood-activating and stasis-resolving medicinal1.活血止痛药(7-7)blood-activating analgesic medicinal
Cross References
Trusted external identifiers retained for this final record.
Cas
31570-39-5
Herb
HBIN020075HBIN020076HBIN036579
Npass
NPC102130NPC72030
Tcmid
15352
Tcmsp
MOL000993MOL001269
Sym Map
SMIT03477SMIT03716SMIT16820
Pub Chem
162965467452722625281384
Tcmbank
TCMBANKIN006891TCMBANKIN008157TCMBANKIN053975TCMBANKIN060022
Etcm Ingredient
Neocembrenecembrene Acembrene,acembrene-A
Itcmdb Generated
ITX-INGREDIENT-1396280653E0ITX-INGREDIENT-3600F16E456AITX-INGREDIENT-632951D2EB8BITX-INGREDIENT-748014442026ITX-INGREDIENT-97621F4D0331ITX-INGREDIENT-B2F18D4B8EE3
Attributes
Merged source attributes and domain-specific metadata.
Ic
3.44643
Jx
2.84922
Jy
2.84922
Bic
0.75168
Cic
0.87548
Phi
7.6547
Sic
0.79743
Log D
6.907
Sc 0
20
Sc 1
20
Sc 2
25
Type
Other ingredients
Alog P
6.907
Chi 0
14.9578
Chi 1
9.48606
Chi 2
8.33612
In Ch I
InChI=1S/C20H32/c1-16(2)20-14-12-18(4)10-6-8-17(3)9-7-11-19(5)13-15-20/h8,10-12,14,16,20H,6-7,9,13,15H2,1-5H3/b14-12-,17-8+,18-10+,19-11+/t20-/m1/s1InChI=1S/C20H32/c1-16(2)20-14-12-18(4)10-6-8-17(3)9-7-11-19(5)13-15-20/h8,11-12,20H,1,6-7,9-10,13-15H2,2-5H3/b17-8+,18-12+,19-11+/t20-/m0/s1InChI=1S/C20H32/c1-16(2)20-14-12-18(4)10-6-8-17(3)9-7-11-19(5)13-15-20/h8,11-12,20H,1,6-7,9-10,13-15H2,2-5H3/b17-8-,18-12-,19-11-/t20-/m1/s1
Mol Wt
272.4759999999999272.476
Pmi X
171.888
Cas Id
31570-39-5
Energy
22.95
Sc 3 C
5
Sc 3 P
26
Smiles
C([H])(/[C@@]1([H])C([H])(C([H])([H])[H])C([H])([H])[H])=C([H])/C(/C([H])([H])[H])=C([H])/C([H])([H])\C([H])=C(/C([H])([H])[H])\C([H])([H])C([H])([H])\C([H])=C(/C([H])([H])[H])\C([H])([H])C1([H])[H]CC1=CCCC(=CCC(CCC(=CCC1)C)C(=C)C)C[C@]1([H])(C([H])(C([H])([H])[H])C([H])([H])[H])C([H])([H])C([H])([H])\C(\C([H])([H])[H])=C([H])\C([H])([H])C([H])([H])\C(\C([H])([H])[H])=C([H])\C([H])([H])C([H])([H])\C(\C([H])([H])[H])=C([H])\C1([H
])[H]
Zagreb
90
37 Flag
37
Chi 3 C
1.36602
Chi 3 P
5.79101
Chi V 0
14.077
Chi V 1
8.1495
Chi V 2
6.62913
C Count
20
Kappa 1
18.05
Kappa 2
9.84959
Kappa 3
8.14792
Mol Log P
6.6178000000000066.761900000000006
N Count
0
O Count
0
P Count
0
Sc 3 Ch
0
S Count
0
Version
v1,v2
Alog P Mr
95.424
Chi 3 Ch
0
Dipole X
-1e-05
Dipole Y
0
Dipole Z
-1e-05
Iac Mean
0.96123
In Ch Ikey
DMHADBQKVWXPPM-JXXMNCPBSA-NVWSPQDDPRITBAM-KPGNMOGWSA-NVWSPQDDPRITBAM-OGLCFNMDSA-N
Is Chiral
0
Ob Score
16.73516.73516516.7351650523.5716508723.57165123.572
Suppress
0
Tcm Name
乳香西伯利亚云杉
Admet Bbb
1.981
Chi V 3 C
1.04433
Chi V 3 P
4.27223
Es Sum D O
0
Es Sum T N
0
E Adj Equ
217.426
E Adj Mag
282.193
Hba Count
0
Hbd Count
0
Iac Total
49.9843
Jurs Rasa
1
Jurs Rncg
0.08027
Jurs Rncs
1.9777
Jurs Rpcg
0
Jurs Rpcs
0
Jurs Rpsa
0
Jurs Sasa
484.985
Jurs Tasa
484.985
Jurs Tpsa
0
Num Atoms
20
Num Bonds
20
Num Rings
1
Shadow Xy
85.0031
Shadow Xz
49.981
Shadow Yz
40.9079
Shadow Nu
2.53807
Tcm Name2
XI BO LI YA YUN SHAN
V Adj Equ
187.598
V Adj Mag
212.877
Mol2 Path
/TCM_database/2003_3d_all/6184.mol2/TCM_database/8.活血化瘀药(33-33)/1.活血止痛药(7-7)/乳香/Structures/cembrene A.mol2
Reference
658, 1521
Chi V 3 Ch
0
Dipole Mag
0
Es Sum Aa N
0
Es Sum Aa O
0
Es Sum D Nh
0
Es Sum Dd C
0
Es Sum Ds N
0
Es Sum S Oh
0
Es Sum Ss O
0
Es Sum T Ch
0
Es Sum Ts C
0
Kappa 1 Am
17.0127
Kappa 2 Am
8.99879
Kappa 3 Am
7.36877
Num Hdonors
0
Num Chains
5
Num Rings3
0
Num Rings4
0
Num Rings5
0
Num Rings6
0
Num Rings7
0
Num Rings8
0
Es Count D O
0
Es Count T N
0
Es Sum Aa Ch
0
Es Sum Aa Nh
0
Es Sum Aaa C
0
Es Sum Aas C
0
Es Sum Aas N
0
Es Sum D Ch2
0
Es Sum Dds N
0
Es Sum Ds Ch
11.881
Es Sum Dss C
4.462
Es Sum S Ch3
11.429
Es Sum S Nh2
0
Es Sum S Nh3
0
Es Sum Ss Nh
0
Es Sum Sss N
0
Jurs Dpsa 1
-484.985
Jurs Dpsa 3
25.6294
Jurs Fnsa 1
1
Jurs Fnsa 2
-1.06169
Jurs Fnsa 3
-0.05285
Jurs Fpsa 1
0
Jurs Fpsa 2
0
Jurs Fpsa 3
0
Jurs Pnsa 1
484.985
Jurs Pnsa 2
-514.901
Jurs Pnsa 3
-25.6294
Jurs Ppsa 1
0
Jurs Ppsa 3
0
Jurs Wnsa 1
235.21
Jurs Wnsa 2
-249.719
Jurs Wnsa 3
-12.4299
Jurs Wpsa 1
0
Jurs Wpsa 3
0
Num Pi Bonds
0
Tcm Name En
RU XIANGSiberian Spruce
Level1 Name
8.活血化瘀药(33-33)
Level2 Name
1.活血止痛药(7-7)
Admet Psa 2 D
0
Es Count Aa N
0
Es Count Aa O
0
Es Count D Nh
0
Es Count Dd C
0
Es Count Ds N
0
Es Count S Oh
0
Es Count Ss O
0
Es Count T Ch
0
Es Count Ts C
0
Es Sum Ss Ch2
5.973
Es Sum Ss Nh2
0
Es Sum Sss Ch
1.42
Es Sum Sss Nh
0
Es Sum Ssss C
0
Es Sum Ssss N
0
Nplus O Count
0
Num H Donors
0
Admet Alog P98
6.907
Admet Ext Ppb
4.64023
Drug Likeness
0.4620.471
Es Count Aa Ch
0
Es Count Aa Nh
0
Es Count Aaa C
0
Es Count Aas C
0
Es Count Aas N
0
Es Count D Ch2
0
Es Count Dds N
0
Es Count Ds Ch
5
Es Count Dss C
3
Es Count S Ch3
5
Es Count S Nh2
0
Es Count S Nh3
0
Es Count Ss Nh
0
Es Count Sss N
0
Es Sum Sssss P
0
Num Hacceptors
0
Num Fragments
1
Num Hydrogens
32
Num Ring Bonds
14
Organic Count
20
Rad Of Gyration
2.15597
Shadow Xyfrac
0.55856
Shadow Xzfrac
0.69553
Shadow Yzfrac
0.68226
Strain Energy
11.74
Es Count Ss Ch2
5
Es Count Ss Nh2
0
Es Count Sss Ch
2
Es Count Sss Nh
0
Es Count Ssss C
0
Es Count Ssss N
0
Molecular Mass
272.25
Molecular Sasa
552.119
Num Metal Atoms
0
Num Rings9 Plus
1
Shadow Xlength
13.505
Shadow Ylength
11.2685
Shadow Zlength
5.32097
Level1 Name En
blood-activating and stasis-resolving medicinal
Level2 Name En
blood-activating analgesic medicinal
Admet Bbb Level
0
Isomeric Smiles
C/C/1=C/CC/C(=C\C[C@H](CC/C(=C\CC1)/C)C(=C)C)/CC/C/1=C\CC/C(=C/C/C=C(/C=C\[C@H](CC1)C(C)C)\C)/CC/C/1=C\CC/C(=C/C[C@@H](CC/C(=C/CC1)/C)C(=C)C)/C
Molecular Savol
471.998
Molecule Weight
272.52
Num Atom Classes
19
Num Bridge Bonds
0
Num H Acceptors
0
Num Repeat Units
0
Admet Ext Cyp2 D6
-1.04475
Admet Solubility
-7.452
Canonical Smiles
CC1=CCCC(=CCC(CCC(=CCC1)C)C(=C)C)CCC1=CCCC(=CCC=C(C=CC(CC1)C(C)C)C)C
Herb Alias Names
(+)-Cembrene A
Minimized Energy
11.21
Molecular Weight
272.250
Molecular Volume
275.77
Molecular Weight
272.468272.47
Num Macro Chains
0
Molecular Formula
C20H32
Molecular Formula
C20H32C20H34
Molecular Formula
C20H32
Num Rotatable Bonds
1
Num Aromatic Bonds
0
Num Aromatic Rings
0
Num Explicit Atoms
20
Num Explicit Bonds
20
Num Negative Atoms
0
Num Positive Atoms
0
Num Macro Residues
0
Num Ring Assemblies
1
Num Rotatable Bonds
1
Molecular Polar Sasa
0
Num Bridge Head Atoms
0
Num Chain Assemblies
4
Num Meso Stereo Atoms
0
Molecular Solubility
-6.835
Admet Ext Hepatotoxic
-10.2156
Admet Unknown Alog P98
0
Molecular Surface Area
348.02
Num Explicit Hydrogens
0
Num H Donors Lipinski
0
Num Pseudo Stereo Atoms
0
Admet Absorption Level
2
Admet Solubility Level
1
Admet Ext Ppb#Prediction
1
Num H Acceptors Lipinski
0
Molecular Polar Surface Area
0
Admet Ext Cyp2 D6#Prediction
0
Molecular Fractional Polar Sasa
0
Admet Ext Ppb Applicability#Md
8.63351
Fda Maximum Daily Dose (Fdamdd)
0.3660.5260.885
Admet Ext Hepatotoxic#Prediction
0
Admet Ext Cyp2 D6 Applicability#Md
11.2708
Admet Ext Ppb Applicability#Mdpvalue
0.999439
Molecular Fractional Polar Surface Area
0
Admet Ext Hepatotoxic Applicability#Md
8.35749
Admet Ext Cyp2 D6 Applicability#Mdpvalue
0.013217
Admet Ext Hepatotoxic Applicability#Mdpvalue
0.766239
Quantitative Estimate Of Drug Likeness(Qed)
0.4620.471